A space managed by WorkflowHub administrators for teams that don't want/need to manage their own space.
Teams: IBISBA Workflows, NMR Workflow, UNLOCK, NanoGalaxy, Galaxy Climate, PNDB, IMBforge, COVID-19 PubSeq: Public SARS-CoV-2 Sequence Resource, LBI-RUD, Nick-test-team, usegalaxy-eu, Italy-Covid-data-Portal, UX trial team, Integrated and Urban Plant Pathology Laboratory, SARS-CoV-2 Data Hubs, lmjxteam2, Australian BioCommons, virAnnot pipeline, Ay Lab
Web page: Not specified
Workflow for Metagenomics from raw reads to annotated bins.
Kraken2 (Taxonomic Read Classification
QUAST (Assembly quality report)
BBmap (Read mapping to assembly)
samtobam (sam to indexed bam)
Type: Common Workflow Language
Submitter: Jasper Koehorst
Workflow for read quality control and trimming.
FastQC (read quality control)
fastp (read quality trimming)
bbduk used for rrna filtering