Kataegis refers to the occurrence of regional hypermutation and is a phenomenon observed in a wide range of malignancies. Using changepoint detection katdetectr aims to identify putative kataegis foci from common data-formats housing genomic variants. Katdetectr has shown to be a robust package for the detection, characterization and visualization of kataegis.
Space: Independent Teams
SEEK ID: https://workflowhub.eu/projects/162
Public web page: https://github.com/ErasmusMC-CCBC/katdetectr
Organisms: No Organisms specified
WorkflowHub PALs: No PALs for this Team
Team created: 26th Apr 2023