Mendel Centre for Plant Genomics and Proteomics
OverviewResearch areas: - Structure, evolution and maintenance of telomeres and their roles in chromosome stability, DNA repair and plant speciation - Epigenetic mechanisms in the regulation of gene expression, chromatin assembly, genome stability and telomere homeostasis - Transcription, replication and DNA repair in the context of nuclear and nucleolar architecture
Space: Independent Teams
SEEK ID: https://workflowhub.eu/projects/178
Public web page: https://www.ceitec.eu/chromatin-molecular-complexes/rg51
Organisms: No Organisms specified
WorkflowHub PALs: No PALs for this Team
Team created: 1st Aug 2023
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https://orcid.org/0000-0003-3876-6581
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GERONIMO
Introduction
GERONIMO is a bioinformatics pipeline designed to conduct high-throughput homology searches of structural genes using covariance models. These models are based on the alignment of sequences and the consensus of secondary structures. The pipeline is built using Snakemake, a workflow management tool that allows for the reproducible execution of analyses on various computational platforms.
The idea for developing GERONIMO emerged from a comprehensive search for [telomerase ...
