NGTax
Version 5

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Work-in-progress

Amplicon analysis workflow using NG-Tax

SEEK ID: https://workflowhub.eu/workflows/45?version=5

Inputs

ID	Name	Description	Type
files	file paths	files to download	string[]
destination	IRODS final destination	Final destination on iRODS	string
forward_primer	Forward primer	Forward primer used	string
reverse_primer	Reverse primer	Reverse primer used	string
reference_db	Reference database	Reference database used in FASTA format	string?
rev_read_len	Reverse read length	Read length of the reverse read	int
for_read_len	Reverse read length	Read length of the reverse read	int
sample	Sample name	Name of the sample being analysed	string

ID	Name	Description	Type
fastqc_output	n/a	n/a	Directory
ngtax_output	n/a	n/a	Directory

Creators and Submitter

Not specified

License

Activity

Views: 220 Downloads: 16

Created: 23rd Jul 2020 at 10:59

Last updated: 15th Oct 2020 at 14:23

Last used: 21st Oct 2020 at 23:55