UNLOCK
OverviewAn open infrastructure for exploring new horizons for research on microbial communities.
Space: Independent Teams
SEEK ID: https://workflowhub.eu/projects/16
Public web page: https://m-unlock.nl
Organisms: No Organisms specified
WorkflowHub PALs: No PALs for this Team
Team start date: 1st Sep 2020
Related items
Workflow for Metagenomics from raw reads to annotated bins. Steps: - workflowquality.cwl: FastQC (control) fastp (trimming) - Kraken2 (Taxonomic Read Classification - SPAdes (Assembly) - QUAST (Assembly quality report) - BBmap (Read mapping to assembly) - samtobam (sam to indexed bam) - metabatContigDepths (jgisummarizebamcontig_depths) - MetaBat2 (binning) - SAPP (bin annotation)
DownloadWork-in-progress
Amplicon analysis workflow using NG-Tax
