Workflow for Metagenomics from raw reads to annotated bins. Steps: - workflowquality.cwl: FastQC (control) fastp (trimming) - Kraken2 (Taxonomic Read Classification - SPAdes (Assembly) - QUAST (Assembly quality report) - BBmap (Read mapping to assembly) - samtobam (sam to indexed bam) - metabatContigDepths (jgisummarizebamcontig_depths) - MetaBat2 (binning) - SAPP (bin annotation)