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SEEK ID: https://workflowhub.eu/projects/88
Public web page: https://elixir-europe.org/communities/toxicology
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Team created: 6th Apr 2022
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Teams: Toxicology community
Organizations: Maastricht University
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BridgeDb tutorial: Gene HGNC name to Ensembl identifier
This tutorial explains how to use the BridgeDb identifier mapping service to translate HGNC names to Ensembl identifiers. This step is part of the OpenRiskNet use case to link Adverse Outcome Pathways to WikiPathways.
First we need to load the Python library to allow calls to the BridgeDb REST webservice:
import requests
Let's assume we're interested ...