WorkflowHub

15 items tagged with 'Workflows'.

People (15)

Volodymyr Savchenko

Teams: ODA, EuroScienceGateway

Organizations: MMODA, EPFL

https://orcid.org/0000-0001-6353-0808

Expertise: astronomy, Data Management, high-performance computing, image analysis, Scientific workflow developement, Software Engineering

Tools: CWL, Machine Learning, Workflows, Python, Snakemake, Databases

Juan Caballero

Teams: MGnify

Organizations: EMBL-EBI

https://orcid.org/0000-0002-6160-3644

Expertise: Bioinformatics, Genomics, Metagenomics, Data Management

Tools: CWL, Jupyter notebook, Nextflow, Molecular Biology, Workflows, Microbiology, Transcriptomics, Perl, Python, R

Jeanette Reinshagen

Teams: EU-Openscreen

Organizations: Fraunhofer Institute for Translational Medicine and Pharmacology ITMP

https://orcid.org/0000-0002-8080-9170

Expertise: Bioinformatics, Cheminformatics, Machine Learning

Tools: Workflows

Bart Nijsse

Teams: UNLOCK

Organizations: UNLOCK

https://orcid.org/0000-0001-9524-5964

Expertise: Metagenomics

Tools: CWL, Workflows

Stephen Moss

Teams: Not specified

Organizations: Not specified

https://orcid.org/0000-0002-1399-293X

Expertise: Bioinformatics, Computer Science, Data Management, Genetics, Genomics, Machine Learning, Metagenomics, NGS, Scientific workflow developement, Software Engineering

Tools: Databases, Galaxy, Genomics, Jupyter notebook, Machine Learning, Nextflow, nf-core, PCR, Perl, Python, R, rtPCR, Snakemake, Transcriptomics, Virology, Web, Web services, Workflows

Dad, husband and PhD. Scientist, technologist and engineer. Bibliophile. Philomath. Passionate about science, medicine, research, computing and all things geeky!

Andrea Zaliani

Teams: EU-Openscreen, OME

Organizations: Fraunhofer Institute for Translational Medicine and Pharmacology ITMP

https://orcid.org/0000-0002-1740-8390

Expertise: Cheminformatics, Bioinformatics

Tools: R, Python, Workflows

Julie Ripoll

Teams: MAB - ATGC

Organizations: Centre National de la Recherche Scientifique (CNRS)

https://orcid.org/0000-0003-1590-8313

Expertise: Bioinformatics, Biostatistics, Bioengineering, Metagenomics, Scientific workflow developement, Data Management, Systems Biology, Ecophysiology

Tools: Transcriptomics, Python, Workflows, Snakemake, R, Conda, Jupyter notebook, Java, Web, Machine Learning, Databases

eric.rivals@lirmm.fr Rivals

Teams: MAB - ATGC

Organizations: Centre National de la Recherche Scientifique (CNRS)

https://orcid.org/0000-0003-3791-3973

Expertise: Bioinformatics, Genomics, algorithm, Machine Learning, Metagenomics, NGS, Computer Science

Tools: Transcriptomics, Genomics, Python, C/C++, Web services, Workflows

Cyril Noel

Teams: SeBiMER

Organizations: IFREMER

https://orcid.org/0000-0002-7139-4073

Expertise: Bioinformatics, Biostatistics, Metabarcoding, Metagenomics

Tools: Workflows, Nextflow, R

Evgenii Tretiakov

Teams: Harkany Lab

Organizations: Medical University of Vienna

https://orcid.org/0000-0001-5920-2190

Expertise: Systems Biology, Bioengineering, Bioinformatics, Neuroscience

Tools: Workflows, Machine Learning, Transcriptomics

Sangram Keshari Sahu

Teams: nf-core

Organizations: IISER, Mohali

https://orcid.org/0000-0001-5010-9539

Expertise: Bioinformatics, Scientific workflow developement, Software Engineering

Tools: Workflows, Nextflow, nf-core, R, Python

Phil Ewels

Teams: nf-core

Organizations: SciLifeLab

https://orcid.org/0000-0003-4101-2502

Expertise: Bioinformatics

Tools: Nextflow, nf-core, Workflows, Python

Bioinformatician in Stockholm, Sweden. Lead for nf-core and MultiQC projects.

Ivan Topolsky

Teams: V-Pipe

Organizations: SIB - Swiss Institute of Bioinformatics

https://orcid.org/0000-0002-7561-0810

Expertise: Bioinformatics, Software Engineering

Tools: Workflows, C/C++, Perl

Medical doctor and bioinformatician

Developer from the Swiss Institute of Bioinformatics (SIB) Working at the Computational Biology Group (CBG) of ETH Zurich.

Diplom in Medicine. MSc in Bioinformatics and Proteomics.

I am also a ski teacher as a hobby.

Foivos Gypas

Teams: IBISBA Workflows

Organizations: Unspecified

Expertise: Bioinformatics

Tools: Workflows, Web services, Python

Dan Fornika

Teams: GalaxyProject SARS-CoV-2

Organizations: BC Centre for Disease Control

https://orcid.org/0000-0002-6178-3585

Expertise: Bioinformatics, Data Management, Molecular Biology

Tools: Databases, PCR, Workflows, Web services