Workflows

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280 Workflows visible to you, out of a total of 291
Work-in-progress

A prototype implementation of the Air Quality Prediction pipeline in Galaxy, using CWL tools.

Type: Galaxy

Creators: Oliver Woolland, Douglas Lowe

Submitter: Oliver Woolland

Stable

Lysozyme in Water simplest version, from COMPSs Tutorial. The original idea of this worklfow comes from http://www.mdtutorials.com/gmx/lysozyme/index.html

Type: PyCOMPSs

Creators: Javier Conejero, Justin Lemkul

Submitter: Raül Sirvent

ABR_Threshold_Detection

What is this?

This code can be used to automatically determine hearing thresholds from ABR hearing curves.

One of the following methods can be used for this purpose:

  • neural network (NN) training,
  • calibration of a self-supervised sound level regression (SLR) method

on given data sets with manually determined hearing thresholds.

Installation:

Run inside the src directory:

Installation as python package

pip install -e ./src (Installation as python
...

Type: Python

Creators: None

Submitter: Elida Schneltzer

Work-in-progress

An example workflow for the Specimen Data Refinery tool, allowing an individual tool to be used

Type: Galaxy

Creators: Laurence Livermore, Oliver Woolland, Oliver Woolland

Submitter: Oliver Woolland

Work-in-progress

An example workflow for the Specimen Data Refinery tool, allowing an individual tool to be used

Type: Galaxy

Creators: Laurence Livermore, Oliver Woolland

Submitter: Oliver Woolland

Work-in-progress

An example workflow to allow users to run the Specimen Data Refinery tools on data provided in an input CSV file.

Type: Galaxy

Creators: Paul Brack, Oliver Woolland, Laurence Livermore

Submitter: Oliver Woolland

Stable

StructuralVariants Workflow

Type: Common Workflow Language

Creators: Laura Rodriguez-Navas, Daniel López-López

Submitter: Laura Rodriguez-Navas

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