Workflows

What is a Workflow?
519 Workflows visible to you, out of a total of 550
Stable

Cluster Comparison COMPSs application

Type: COMPSs

Creators: Rosa M. Badia, Adam Hospital

Submitter: Raül Sirvent

Stable

Cholesky factorisation COMPSs application

Type: COMPSs

Creators: Rosa M. Badia, Adam Hospital

Submitter: Raül Sirvent

Stable

K-means COMPSs application

Type: COMPSs

Creators: Rosa M. Badia, Adam Hospital

Submitter: Raül Sirvent

Stable

Wordcount reduce version COMPSs application

Type: COMPSs

Creators: Rosa M. Badia, Adam Hospital

Submitter: Raül Sirvent

Stable

Wordcount merge version COMPSs application

Type: COMPSs

Creators: Rosa M. Badia, Adam Hospital

Submitter: Raül Sirvent

Stable

Lysozyme in water full COMPSs application, using dataset_small

Type: COMPSs

Creator: Rosa M. Badia

Submitter: Raül Sirvent

Stable

Lysozyme in water full COMPSs application, using dataset_small

Type: COMPSs

Creator: Rosa M. Badia

Submitter: Raül Sirvent

Type: COMPSs

Creator: Joser Carbonel

Submitter: Miguel Vazquez

Framework for construction of phylogenetic networks on High Performance Computing (HPC) environment

Introduction

Phylogeny refers to the evolutionary history and relationship between biological lineages related by common descent. Reticulate evolution refers to the origination of lineages through the complete or partial merging of ancestor lineages. Networks may be used to represent lineage independence events in non-treelike phylogenetic processes.

The methodology for reconstructing networks ...

Contiging Solo w/HiC:

Generate phased assembly based on PacBio Hifi Reads using HiC data from the same individual for phasing.

Inputs

  1. Hifi long reads [fastq]
  2. HiC forward reads (if multiple input files, concatenated in same order as reverse reads) [fastq]
  3. HiC reverse reads (if multiple input files, concatenated in same order as forward reads) [fastq]
  4. K-mer database [meryldb]
  5. Genome profile summary generated by Genomescope [txt]
  6. Name of first assembly
  7. Name of second ...

Type: Galaxy

Creator: Galaxy, VGP

Submitter: WorkflowHub Bot

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