Workflow Type: Nextflow

Implementation of the IMPaCT-Data quality control workflow for WES data in nf-core/sarek workflow. Sarek is an analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing.

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IMPaCT-Data QC + sarek (master @ 81c1fc9) (latest) Created 25th Jun 2024 at 07:53 by Arnau Soler Costa

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IMPaCT-Data QC + sarek (master @ fc7059f) Created 12th Jun 2024 at 14:11 by Arnau Soler Costa

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IMPaCT-data QC + sarek (master @ fc7059f) (earliest) Created 5th Jun 2024 at 16:05 by Arnau Soler Costa

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help Creators and Submitter
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Additional credit

All the Sarek team, nf-core comunity and people in the IMPaCT-data project.

Submitter
Citation
Soler Costa, A., & Curwin, A. (2024). IMPaCT-data quality control workflow implementation in nf-core/Sarek. WorkflowHub. https://doi.org/10.48546/WORKFLOWHUB.WORKFLOW.1030.1
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Views: 3015   Downloads: 429

Created: 5th Jun 2024 at 16:05

Last updated: 25th Jun 2024 at 08:30

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Total size: 113 MB
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