Workflow Type: Galaxy
Open
Work-in-progress
Just the cleaning then assembly of all reads. TO explore further follow one of the paths described in "Global view" (WF 0)
Steps
ID | Name | Description |
---|---|---|
0 | fastp: clean reads | toolshed.g2.bx.psu.edu/repos/iuc/fastp/fastp/0.20.1+galaxy0 |
1 | Shovill | toolshed.g2.bx.psu.edu/repos/iuc/shovill/shovill/1.1.0+galaxy0 |
Outputs
ID | Name | Description | Type |
---|---|---|---|
_anonymous_output_1 | _anonymous_output_1 | n/a |
|
fastp on input dataset(s): HTML report | fastp on input dataset(s): HTML report | n/a |
|
fastp on input dataset(s): Read 1 output | fastp on input dataset(s): Read 1 output | n/a |
|
Shovill on input dataset(s) Log file | Shovill on input dataset(s) Log file | n/a |
|
Shovill on input dataset(s): Contigs | Shovill on input dataset(s): Contigs | n/a |
|
Version History
Version 1 (earliest) Created 4th Feb 2021 at 09:11 by johan Rollin
Added/updated 1 files
Open
master
bcc033e
![help](/assets/famfamfam_silk/information-8cfe563be76fb11b27c8ba778f5d40ce6800b244d6ca58ef6e9973308efbe534.png)
Creators
Not specifiedSubmitter
License
Activity
Views: 3176 Downloads: 195
Created: 4th Feb 2021 at 09:11
Last updated: 10th Feb 2023 at 10:06
![help](/assets/famfamfam_silk/information-8cfe563be76fb11b27c8ba778f5d40ce6800b244d6ca58ef6e9973308efbe534.png)
![help](/assets/famfamfam_silk/information-8cfe563be76fb11b27c8ba778f5d40ce6800b244d6ca58ef6e9973308efbe534.png)
None