Workflows

What is a Workflow?
816 Workflows visible to you, out of a total of 890

Protein 3D structure prediction pipeline

Type: Nextflow

Creators: Athanasios Baltzis, Jose Espinosa-Carrasco, Harshil Patel

Submitter: WorkflowHub Bot

Proteogenomics database creation workflow using pypgatk framework.

Type: Nextflow

Creator: Husen M. Umer & Yasset Perez-Riverol

Submitter: WorkflowHub Bot

Deprecated

De novo assembly pipeline for 10X linked-reads, used at the SciLifeLab National Genomics Infrastructure.

Type: Nextflow

Creator: Remi-Andre Olsen (@remiolsen)

Submitter: WorkflowHub Bot

A comprehensive cancer NGS analysis and reporting pipeline

Type: Nextflow

Creator: Stephen Watts

Submitter: WorkflowHub Bot

Nascent Transcription Processing Pipeline

Type: Nextflow

Creators: Ignacio Tripodi, Margaret Gruca

Submitter: WorkflowHub Bot

A pipeline to demultiplex, QC and map Nanopore data

Type: Nextflow

Creator: Chelsea Sawyer

Submitter: WorkflowHub Bot

MNase-seq analysis pipeline using BWA and DANPOS2.

Type: Nextflow

Creator: Harshil Patel

Submitter: WorkflowHub Bot

Identify and quantify peptides from mass spectrometry raw data

Type: Nextflow

Creator: Leon Bichmann

Submitter: WorkflowHub Bot

MARS-seq v2 preprocessing pipeline

Type: Nextflow

Creator: Martin Proks

Submitter: WorkflowHub Bot

Deprecated

Compare DNA/RNA/protein sequences on k-mer content

Type: Nextflow

Creator: Olga Botvinnik

Submitter: WorkflowHub Bot

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