POD5 by pore
master @ b2977c5

Workflow Type: Snakemake
Stable

pod5_by_pore

A Snakemake workflow to take the POD5 files produced by an Oxford Nanopore sequencing run and re-batch them by pore (ie. by channel).

This is useful if you want to run duplex basecalling because you can meaningfully run "dorado duplex" on a single (or a subset of) the POD5 files.

Know issues

It is assumed all POD5 input files are from the same sequencing run, but this is not checked.

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master @ b2977c5 (earliest) Created 24th May 2024 at 15:28 by Tim Booth

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Created: 24th May 2024 at 15:28

Last updated: 24th May 2024 at 15:32

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