Workflow Type: Common Workflow Language
Frozen
Stable
Complete workflow for TANGO as reported in Lecomte et al (2024), "Revealing the dynamics and mechanisms of bacterial interactions in cheese production with metabolic modelling", Metabolic Eng. 83:24-38 https://doi.org/10.1016/j.ymben.2024.02.014
- Parameters for individual models are obtained by optimization
- Individual dynamics and community dynamics are simulated
- Figures for the manuscript are assembled from the results.
Click and drag the diagram to pan, double click or use the controls to zoom.
Inputs
ID | Name | Description | Type |
---|---|---|---|
community | n/a | n/a |
|
pure_culture | n/a | n/a |
|
which_figures | n/a | n/a |
|
Steps
ID | Name | Description |
---|---|---|
dynamics | n/a | n/a |
mkdir_figures | n/a | n/a |
mkdir_models | n/a | n/a |
mkdir_results | n/a | n/a |
optimize | n/a | n/a |
plot_figures | n/a | n/a |
Outputs
ID | Name | Description | Type |
---|---|---|---|
figures | n/a | n/a |
|
results | n/a | n/a |
|
Version History
Version 0.9.0 (earliest) Created 3rd May 2024 at 08:03 by David James Sherman
Initial commit
Frozen
Version-0.9.0
fd9ed7e
Creators and Submitter
Creators
Not specifiedSubmitter
Discussion Channel
Activity
Views: 733 Downloads: 144
Created: 3rd May 2024 at 08:03
Annotated Properties
Topic annotations
Tags
This item has not yet been tagged.
Attributions
None