Workflow Type: Scipion
Work-in-progress

The second-level complexity workflow is one among a collection of workflows designed to address tasks up to CTF estimation. In addition to the functionalities provided by the layer 0 workflow, this workflow aims to enhance the quality of acquisition images using quality protocols.

Quality control protocols

  • Movie max shift: automatic reject those movies whose frames move more than a given threshold. 

  • Tilt analysis: quality score based in the Power Spectrum Density (astigmatism and tilt) 

  • CTF consensus: acts as a filter discarding micrographs based on their CTF (limit resolution, defocus, astigmatism, etc.).

Advantages: 

  • More control of the acquisition quality

  • Reduce unnecessary processing time and storage

Version History

Version 2 (latest) Created 10th Jul 2024 at 15:17 by Pablo Conesa

Testing versions. Actually same as version 1.


Open master 0238dac

Version 1 (earliest) Created 4th Oct 2023 at 14:01 by Daniel Marchan

Dynamic templates


Frozen Version-1 1bcc858
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Views: 2455   Downloads: 715

Created: 4th Oct 2023 at 14:01

Last updated: 10th Jul 2024 at 15:21

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