Genetic Design Version 1
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Run on usegalaxy.euThis workflow converts the top-ranking predicted pathways from the "RetroSynthesis" and "Pathway Analysis" workflows to plasmids intended to be expressed in the specified organism
Steps
| ID | Name | Description |
|---|---|---|
| 0 | rpSBML TAR | |
| 1 | GEM SBML | |
| 2 | Max (UNIPROT) enzymes per reactions | |
| 3 | Top pathways to convert to SBOL | |
| 4 | List of genetic parts | |
| 5 | Extract Taxonomy | extractTaxonomy |
| 6 | Selenzyme | rpSelenzyme |
| 7 | SBML to SBOL | rpSBMLtoSBOL |
| 8 | Parts Genie | PartsGenie |
| 9 | OptDoE | rpOptBioDes |
| 10 | DNA Weaver | DNAWeaver |
| 11 | LCR Genie | LCRGenie |
Outputs
| ID | Name | Description | Type |
|---|---|---|---|
| output | output | n/a | |
| output | output | n/a | |
| output | output | n/a | |
| output | output | n/a | |
| output | output | n/a | |
| output | output | n/a | |
| output | output | n/a |
Creators and Submitter
Views: 758 Downloads: 43
Created: 29th May 2020 at 11:05
Last used: 26th Jan 2022 at 21:27
AttributionsNone
Version History
Version 1 (earliest) Created 29th May 2020 at 11:05 by Melchior du Lac
Added/updated 1 files
Open
master778986d
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https://orcid.org/0000-0002-9984-4689
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