Stable
This workflow converts the top-ranking predicted pathways from the "RetroSynthesis" and "Pathway Analysis" workflows to plasmids intended to be expressed in the specified organism
Steps
ID | Name | Description |
---|---|---|
0 | rpSBML TAR | |
1 | GEM SBML | |
2 | Max (UNIPROT) enzymes per reactions | |
3 | Top pathways to convert to SBOL | |
4 | List of genetic parts | |
5 | Extract Taxonomy | extractTaxonomy |
6 | Selenzyme | rpSelenzyme |
7 | SBML to SBOL | rpSBMLtoSBOL |
8 | Parts Genie | PartsGenie |
9 | OptDoE | rpOptBioDes |
10 | DNA Weaver | DNAWeaver |
11 | LCR Genie | LCRGenie |
Outputs
ID | Name | Description | Type |
---|---|---|---|
output | output | n/a | json |
output | output | n/a | tar |
output | output | n/a | xml |
output | output | n/a | xml |
output | output | n/a | tar |
output | output | n/a | tar |
output | output | n/a | tar |

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Views: 383 Downloads: 26
Created: 29th May 2020 at 11:05
Last used: 3rd Mar 2021 at 06:35

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Version History
Version 1 Created 29th May 2020 at 11:05 by Melchior du Lac
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