Workflow Type: Galaxy
Stable

This workflow converts the top-ranking predicted pathways from the "RetroSynthesis" and "Pathway Analysis" workflows to plasmids intended to be expressed in the specified organism

Steps

ID Name Description
0 rpSBML TAR
1 GEM SBML
2 Max (UNIPROT) enzymes per reactions
3 Top pathways to convert to SBOL
4 List of genetic parts
5 Extract Taxonomy extractTaxonomy
6 Selenzyme rpSelenzyme
7 SBML to SBOL rpSBMLtoSBOL
8 Parts Genie PartsGenie
9 OptDoE rpOptBioDes
10 DNA Weaver DNAWeaver
11 LCR Genie LCRGenie

Outputs

ID Name Description Type
output output n/a json
output output n/a tar
output output n/a xml
output output n/a xml
output output n/a tar
output output n/a tar
output output n/a tar
help Creators and Submitter
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Views: 669   Downloads: 40

Created: 29th May 2020 at 11:05

Last used: 2nd Dec 2021 at 00:34

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Version History

Version 1 Created 29th May 2020 at 11:05 by Melchior du Lac

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