Workflow constructed from history 'test dwc from PNDB Data package EML DwC annotations'
Version 1

Workflow Type: Galaxy

Workflow to take DataOne data packages (raw datasets + metadata written in Ecological Metadata Standard) as input and create a DwC occurence.csv file almost ready to put in a Dawrin core Archive using eml-annotations at the attribute level


ID Name Description Type
BDD_Kakila_v2_2021021_observateur.tsv BDD_Kakila_v2_2021021_observateur.tsv n/a
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BDD_Kakila_v2_20210221_observation.tsv BDD_Kakila_v2_20210221_observation.tsv n/a
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BDD_Kakila_v2_20210221_organisme.tsv BDD_Kakila_v2_20210221_organisme.tsv n/a
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BDD_Kakila_v2_20210221_secteur_geog.tsv BDD_Kakila_v2_20210221_secteur_geog.tsv n/a
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BDD_Kakila_v2_20210221_sortie.tsv BDD_Kakila_v2_20210221_sortie.tsv n/a
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BDD_Kakila_v2_20210221_taxon.tsv BDD_Kakila_v2_20210221_taxon.tsv n/a
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Kakila_database_of_marine_mammal_observation_data_in_the_AGOA_sanctuary_-_French_Antilles.xml Kakila_database_of_marine_mammal_observation_data_in_the_AGOA_sanctuary_-_French_Antilles.xml n/a
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ID Name Description
7 Join
8 Search in textfiles
9 Search in textfiles
10 Join
11 Select Grep1
12 Select Grep1
13 Join
14 Join
15 Regex Replace
16 Join
17 Join
18 Column Regex Find And Replace
19 Join
20 Join
21 Column Regex Find And Replace
22 Transpose
23 Filter Tabular
24 Join
25 Unique
26 Transpose
27 Remove beginning Remove beginning1


ID Name Description Type
_anonymous_output_1 _anonymous_output_1 n/a
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_anonymous_output_2 _anonymous_output_2 n/a
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_anonymous_output_3 _anonymous_output_3 n/a
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_anonymous_output_4 _anonymous_output_4 n/a
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_anonymous_output_5 _anonymous_output_5 n/a
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_anonymous_output_6 _anonymous_output_6 n/a
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_anonymous_output_7 _anonymous_output_7 n/a
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_anonymous_output_8 _anonymous_output_8 n/a
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_anonymous_output_9 _anonymous_output_9 n/a
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_anonymous_output_10 _anonymous_output_10 n/a
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_anonymous_output_11 _anonymous_output_11 n/a
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_anonymous_output_12 _anonymous_output_12 n/a
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_anonymous_output_13 _anonymous_output_13 n/a
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_anonymous_output_14 _anonymous_output_14 n/a
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_anonymous_output_15 _anonymous_output_15 n/a
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_anonymous_output_16 _anonymous_output_16 n/a
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_anonymous_output_17 _anonymous_output_17 n/a
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_anonymous_output_18 _anonymous_output_18 n/a
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_anonymous_output_19 _anonymous_output_19 n/a
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_anonymous_output_20 _anonymous_output_20 n/a
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_anonymous_output_21 _anonymous_output_21 n/a
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Version History

Version 1 (earliest) Created 9th Apr 2021 at 16:45 by Yvan Le Bras

Added/updated 1 files

Open master 7dbdd02
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Views: 2700   Downloads: 178

Created: 9th Apr 2021 at 16:45

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Total size: 48.8 KB
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