Phil Ewels
Bioinformatician in Stockholm, Sweden. Lead for nf-core and MultiQC projects.
SEEK ID: https://workflowhub.eu/people/45
Location:
Sweden
ORCID:
https://orcid.org/0000-0003-4101-2502
Joined: 22nd Jul 2020
Expertise: Bioinformatics
Their tagsRelated items
A community effort to collect a curated set of analysis pipelines built using Nextflow.
Teams: nf-core
Web page: https://nf-co.re
A community effort to collect a curated set of analysis pipelines built using Nextflow.
Space: nf-core
Public web page: https://nf-co.re
Abstract (Expand)
Authors: Paul Brack, Peter Crowther, Stian Soiland-Reyes, Stuart Owen, Douglas Lowe, Alan R. Williams, Quentin Groom, Mathias Dillen, Frederik Coppens, Björn Grüning, Ignacio Eguinoa, Philip Ewels, Carole Goble
Date Published: 24th Mar 2022
Publication Type: Journal
metaboigniter is bioinformatics pipeline for pre-processing of mass spectrometry-based metabolomics data. It can be used to perform quantification and identification based on MS1 and MS2 data. The backbone of pipeline is based on XCMS, OpenMS, CAMERA, MSnbase, MetFrag, CSIFingerID, CFM-ID, and several other customized tools to noise filtering, quantification and identification both for library and in-silico identification. Please go on to this page to learn how to use the workflow
The pipeline ...
DownloadRNA sequencing analysis pipeline using STAR, HISAT2 and Salmon with gene counts and quality control.
