FAIR Computational Workflows
OverviewPresentations and events associated with work in FAIR Guiding Principles for Computational Workflows.
Space: ELIXIR
SEEK ID: https://workflowhub.eu/projects/76
Public web page: https://workflows.community/groups/fair/
Organisms: No Organisms specified
WorkflowHub PALs: No PALs for this Team
Team created: 1st Dec 2021
Related items
Teams: IBISBA Workflows, GalaxyProject SARS-CoV-2, BioBB Building Blocks, Common Workflow Language (CWL) community, BioExcel Best Practice Guides, Specimen Data Refinery, FAIR Computational Workflows, Vertebrate Genomes Pipelines in Galaxy, DARE-FX
Organizations: The University of Manchester
https://orcid.org/0000-0001-9842-9718
ELIXIR is an intergovernmental organisation that brings together life science resources from across Europe. These resources include databases, software tools, training materials, cloud storage and supercomputers.
The goal of ELIXIR is to coordinate these resources so that they form a single infrastructure. This infrastructure makes it easier for scientists to find and share data, exchange expertise, and agree on best practices. Ultimately, it will help them gain new insights into how living ...
Teams: ELIXIR Training, FAIR Computational Workflows
Web page: https://elixir-europe.org/
Abstract (Expand)
Authors: Paul Brack, Peter Crowther, Stian Soiland-Reyes, Stuart Owen, Douglas Lowe, Alan R. Williams, Quentin Groom, Mathias Dillen, Frederik Coppens, Björn Grüning, Ignacio Eguinoa, Philip Ewels, Carole Goble
Date Published: 24th Mar 2022
Publication Type: Journal
Abstract (Expand)
Authors: Alex Hardisty, Paul Brack, Carole Goble, Laurence Livermore, Ben Scott, Quentin Groom, Stuart Owen, Stian Soiland-Reyes
Date Published: 7th Mar 2022
Publication Type: Journal
Abstract (Expand)
Authors: Rafael Ferreira da Silva, Henri Casanova, Kyle Chard, Ilkay Altintas, Rosa M Badia, Bartosz Balis, Taina Coleman, Frederik Coppens, Frank Di Natale, Bjoern Enders, Thomas Fahringer, Rosa Filgueira, Grigori Fursin, Daniel Garijo, Carole Goble, Dorran Howell, Shantenu Jha, Daniel S. Katz, Daniel Laney, Ulf Leser, Maciej Malawski, Kshitij Mehta, Loic Pottier, Jonathan Ozik, J. Luc Peterson, Lavanya Ramakrishnan, Stian Soiland-Reyes, Douglas Thain, Matthew Wolf
Date Published: 1st Nov 2021
Publication Type: Journal
Abstract (Expand)
Authors: Anna-Lena Lamprecht, Magnus Palmblad, Jon Ison, Veit Schwämmle, Mohammad Sadnan Al Manir, Ilkay Altintas, Christopher J. O. Baker, Ammar Ben Hadj Amor, Salvador Capella-Gutierrez, Paulos Charonyktakis, Michael R. Crusoe, Yolanda Gil, Carole Goble, Timothy J. Griffin, Paul Groth, Hans Ienasescu, Pratik Jagtap, Matúš Kalaš, Vedran Kasalica, Alireza Khanteymoori, Tobias Kuhn, Hailiang Mei, Hervé Ménager, Steffen Möller, Robin A. Richardson, Vincent Robert, Stian Soiland-Reyes, Robert Stevens, Szoke Szaniszlo, Suzan Verberne, Aswin Verhoeven, Katherine Wolstencroft
Date Published: 2021
Publication Type: Journal
Abstract (Expand)
Authors: Carole Goble, Sarah Cohen-Boulakia, Stian Soiland-Reyes, Daniel Garijo, Yolanda Gil, Michael R. Crusoe, Kristian Peters, Daniel Schober
Date Published: 2020
Publication Type: Journal
Presented at Swedish eResearch Centre meeting, 13 may 2022
Creator: Carole Goble
Submitter: Carole Goble
External LinkKeynote JOBIM 2021 (French Bioinformatics Conference)
FAIR Computational Workflows https://jobim2021.sciencesconf.org/ 8 July 2021
Computational workflows capture precise descriptions of the steps and data dependencies needed to carry out computational data pipelines, analysis and simulations in many areas of Science, including the Life Sciences. The use of computational workflows to manage these multi-step computational processes has accelerated in the past few years driven by the need for ...
Creator: Carole Goble
Submitter: Carole Goble
EOSC-Life FAIR hackathon 2021 Session 3: Workflow & Tools FAIRification
Creators: Carole Goble, Stuart Owen, Simone Leo, Finn Bacall, Stian Soiland-Reyes, Douglas Lowe
Submitter: Carole Goble
So, you want to build a pan-national digital space for bioscience data and methods? That works with a bunch of pre-existing data repositories and processing platforms? So you can share FAIR workflows and move them between services? Package them up with data and other stuff (or just package up data for that matter)? How? WorkflowHub (https://workflowhub.eu) and RO-Crate Research Objects (https://www.researchobject.org/ro-crate) that’s how! A step towards FAIR Digital Objects gets a workout. Keynote ...
Creator: Carole Goble
Submitter: Carole Goble
Keynote presented at WORKS 2021 https://works-workshop.org/
16th Workshop on Workflows in Support of Large-Scale Science November 15, 2021 Held in conjunction with SC21: The International Conference for High Performance Computing, Networking, Storage and Analysis
Creator: Carole Goble
Submitter: Carole Goble
EOSC-Life 3rd Open Call Biohackathon induction workshop
Start Date: 16th Dec 2021
End Date: 16th Dec 2021
Event Website: https://docs.google.com/document/d/1Ks7mf7xVLdnP4vLWj0zcJ2dvOXWtQyAu/edit
Country: Not specified
City: Virtual
virtually co-located with the 17th IEEE International Conference on eScience (eScience 2021)
This discussion-focused workshop examines how the FAIR (Findable, Accessible, Interoperable, Reusable) principles are and can be applied to eScience research objects beyond data. Invited speakers will present the idea of FAIR and its application to objects such as software, workflows, machine learning models, and executable notebooks, and where FAIR is going. Invited talks will be followed by a panel ...
Start Date: 20th Sep 2021
End Date: 20th Sep 2021
Event Website: https://researchsoft.github.io/FAIReScience/
Country: Not specified
City: Virtual
The public and the press already expect to assess the trustworthiness of research relevant to pressing social and public health issues in terms of transparency. While widely recognized as a critical component of research reproducibility in principle, the promise of making research fully transparent—and scientific claims easier to evaluate—via reliable provenance has yet to be realized in full. In particular, it is still far from routine for researchers in the natural, social, and data sciences ...
Start Date: 22nd Jul 2021
End Date: 22nd Jul 2021
Event Website: https://iitdbgroup.github.io/ProvenanceWeek2021/t7.html
Country: 
United States
City: Virtual
The FAIR Principles have two aspects: They were written specifically for research data and they also claim to be general for all research objects. In practice, this means that while the high-level concepts (findable, accessible, interoperable, and reusable) are generally applicable, the details of the wording, their context, and how they are applied is not. Different groups have been studying how the FAIR principles could be applied to other types of research objects, such as research software, ...
Start Date: 22nd Jun 2021
End Date: 22nd Jun 2021
Event Website: https://www.go-fair.org/events/fair-festival-2021/
Country: Not specified
City: Virtual
Date: Friday 11 June 2021, 10.00 CEST
Chairs: Carole Goble, Stian Soiland-Reyes, Salvador Capella-Gutiérrez, José María Fernández González and Frederik Coppens
In Life Sciences, experimental laboratory procedures usually have a lifespan since their first inception, wide adoption along the years, and later being superseded by others. The same applies to the analysis of the generated experimental data. Workflow Lifecycle represents the different states of workflows during their “life”. This workshop ...
Start Date: 11th Jun 2021
End Date: 11th Jun 2021
Event Website: https://docs.google.com/document/d/1AOE9jLO5EbUFu9NTe0B-z_jx8eQGIMSySkMLRMYvXO0/edit#heading=h.podt37y5jukq
Country: Not specified
City: Virtual
The results of the mentimeter for the FAIR workflows section of the EOSC-Life 3rd Open Call projects pre-hackathon induction
Creators: Carole Goble, Stian Soiland-Reyes, Stuart Owen, Finn Bacall, Simone Leo, Douglas Lowe
Submitter: Carole Goble
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