Galaxy workflow demonstrating the usage of EODIE Galaxy Tool
Version 1

Workflow Type: Galaxy
Stable

This workflow demonstrates the usage of EODIE, a toolkit to extract object based timeseries information from Earth Observation data.

EODIE is a toolkit to extract object based timeseries information from Earth Observation data.

The EODIE code can be found on Gitlab .

The goal of EODIE is to ease the extraction of time series information at object level. Today, vast amounts of Earth Observation data are available to the users via for example earth explorer or scihub. Often, not the whole images are needed for exploitation, but only the timeseries of a certain feature on object level. Objects may be polygons depicting agricultural field parcels, forest plots, or areas of a certain land cover type.

EODIE takes the objects in as polygons in a shapefile as well as the timeframe of interest and the features (eg vegetation indices) to be extracted. The output is a per polygon timeseries of the selected features over the timeframe of interest.

Online documentation EODIE documentation can be found here.

Abstract CWL Automatically generated from the Galaxy workflow file: Workflow constructed from history 'EODIE Sentinel'

Inputs

ID Name Description Type
S2B_MSIL2A_20200626T095029_N0214_R079_T34VFN_20200626T123234_tar n/a Sentinel2 input data. This input dataset corresponds to the data itself while sentinel2_tiles_world would be the corresponding shapefile for the tile.
  • File
sentinel2_tiles_world n/a This input dataset corresponds to the Sentinel-2 tile shapefile, originally provided by https://fromgistors.blogspot.com/2016/10/how-to-identify-sentinel-2-granule.html,
  • File
test_parcels_32635 n/a This input dataset is a shapefile corresponding the the area of interest e.g. on which statistics such as NDVI will be computed.
  • File

Steps

ID Name Description
3_EODIE n/a n/a

Version History

Version 1 (earliest) Created 11th Mar 2022 at 12:32 by Anne Fouilloux

Initial commit


Frozen Version-1 c71fe30
help Creators and Submitter
Creator
Submitter
Citation
Fouilloux, A. (2022). Galaxy workflow demonstrating the usage of EODIE Galaxy Tool. WorkflowHub. https://doi.org/10.48546/WORKFLOWHUB.WORKFLOW.274.1
Activity

Views: 396

Created: 11th Mar 2022 at 12:32

Last used: 8th Dec 2022 at 16:05

help Attributions

None

Total size: 10.1 KB
Powered by
(v.1.12.3)
Copyright © 2008 - 2022 The University of Manchester and HITS gGmbH

By continuing to use this site you agree to the use of cookies