Workflow Type: Galaxy
Open
Stable
The workflow takes ONT reads collection, runs SeqKit and Nanoplot. The main outputs are a table and plots of raw reads stats.
Inputs
ID | Name | Description | Type |
---|---|---|---|
ONT raw reads collection | #main/ONT raw reads collection | n/a |
|
Steps
ID | Name | Description |
---|---|---|
1 | NanoPlot | toolshed.g2.bx.psu.edu/repos/iuc/nanoplot/nanoplot/1.41.0+galaxy0 |
2 | SeqKit ONT raw | toolshed.g2.bx.psu.edu/repos/iuc/seqkit_stats/seqkit_stats/2.3.1+galaxy1 |
3 | SeqKit ONT | toolshed.g2.bx.psu.edu/repos/nml/collapse_collections/collapse_dataset/5.1.0 |
Version History
Version 1 (earliest) Created 8th Jan 2024 at 15:25 by Diego De Panis
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8d0622f
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ERGA
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Views: 1902 Downloads: 165 Runs: 0
Created: 8th Jan 2024 at 15:25
Last updated: 8th Jan 2024 at 15:57
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