nf-core
A community effort to collect a curated set of analysis pipelines built using Nextflow.
Web page: https://nf-co.re
Funding details: Related items
Teams: Intergalactic Workflow Commission (IWC), Vertebrate Genomes Pipelines in Galaxy, nf-core
Organizations: Bots, European Galaxy Team
Teams: nf-core
Organizations: National University of Ireland, Galway
https://orcid.org/0000-0003-4101-2502Bioinformatician in Stockholm, Sweden. Lead for nf-core and MultiQC projects.
A community effort to collect a curated set of analysis pipelines built using Nextflow.
Space: nf-core
Public web page: https://nf-co.re
Country: Not specified
City: Not specified
Web page: Not specified
Phasing and imputation pipeline
From metagenomes to peptides
Type: Nextflow
Creators: Sabrina Krakau, Leon Kuchenbecker and Till Englert
Submitter: WorkflowHub Bot
Single-cell/nuclei pipeline for data derived from Oxford Nanopore
Pipeline to run and benchmark multiple sequence alignment tools.
Pairwise alignment pipeline (genome to genome or reads to genome)
A pipeline for de novo transcriptome assembly of short reads from bulk RNA-seq
A pipeline for ortholog fetching and analysis
GATK4 RNA variant calling pipeline
Nextflow rnafusion analysis pipeline, part of the nf-core community.
An analysis pipeline for Molecular Cartography data from Resolve Biosciences.
Precision HLA typing from next-generation sequencing data.
Type: Nextflow
Creators: Christopher Mohr, Alexander Peltzer, Sven Fillinger
Submitter: WorkflowHub Bot
Pipeline for the analysis of crispr data
Type: Nextflow
Creators: mirpedrol , mirpedrol , Júlia Mir Pedrol, mirpedrol , mirpedrol , Laurence Kuhlburger
Submitter: WorkflowHub Bot
16S rRNA amplicon sequencing analysis workflow using QIIME2.
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