WorkflowHub

9 items tagged with 'Software Engineering'.

People (9)

Bruno P. Kinoshita

Teams: BSC-CES

Organizations: Barcelona Supercomputing Center (BSC-CNS)

https://orcid.org/0000-0001-8250-4074

Expertise: Scientific workflow developement, workflow managers, Software Engineering, open source, fuzzy logic, graphs

Tools: CWL, Autosubmit, Cylc, ecFlow

Research Engineer (Workflow Engineer) at the Barcelona Supercomputing Center (BSC) in Barcelona, Spain. Working on the Autosubmit workflow manager.

Previously NIWA/Cylc, and Curii/CWL.

Volodymyr Savchenko

Teams: ODA, EuroScienceGateway

Organizations: MMODA, EPFL

https://orcid.org/0000-0001-6353-0808

Expertise: astronomy, Data Management, high-performance computing, image analysis, Scientific workflow developement, Software Engineering

Tools: CWL, Machine Learning, Workflows, Python, Snakemake, Databases

Nils Hoffmann

Teams: de.NBI Cloud

Organizations: de.NBI Cloud

https://orcid.org/0000-0002-6540-6875

Expertise: Bioinformatics, Cheminformatics, Software Engineering, Metabolomics, Lipidomics

Matous Elphick

Teams: Not specified

Organizations: Not specified

Expertise: image analysis, Software Engineering, Computer Science

Tools: Napari, Python

Elida Schneltzer

Teams: Applied Computational Biology at IEG/HMGU

Organizations: Helmholtz Zentrum München

https://orcid.org/0000-0003-4796-1661

Expertise: Software Engineering, Machine Learning, AI

Tools: Java, Jupyter notebook, Web services, Python

Stephen Moss

Teams: Not specified

Organizations: Not specified

https://orcid.org/0000-0002-1399-293X

Expertise: Bioinformatics, Computer Science, Data Management, Genetics, Genomics, Machine Learning, Metagenomics, NGS, Scientific workflow developement, Software Engineering

Tools: Databases, Galaxy, Genomics, Jupyter notebook, Machine Learning, Nextflow, nf-core, PCR, Perl, Python, R, rtPCR, Snakemake, Transcriptomics, Virology, Web, Web services, Workflows

Dad, husband and PhD. Scientist, technologist and engineer. Bibliophile. Philomath. Passionate about science, medicine, research, computing and all things geeky!

Philip Kensche

Teams: Not specified

Organizations: Not specified

https://orcid.org/0000-0003-1299-9600

Expertise: Bioinformatics, Molecular Biology, Computer Science, NGS, Software Engineering

Tools: Nextflow, Roddy

Sangram Keshari Sahu

Teams: nf-core

Organizations: IISER, Mohali

https://orcid.org/0000-0001-5010-9539

Expertise: Bioinformatics, Scientific workflow developement, Software Engineering

Tools: Workflows, Nextflow, nf-core, R, Python

Ivan Topolsky

Teams: V-Pipe

Organizations: SIB - Swiss Institute of Bioinformatics

https://orcid.org/0000-0002-7561-0810

Expertise: Bioinformatics, Software Engineering

Tools: Workflows, C/C++, Perl

Medical doctor and bioinformatician

Developer from the Swiss Institute of Bioinformatics (SIB) Working at the Computational Biology Group (CBG) of ETH Zurich.

Diplom in Medicine. MSc in Bioinformatics and Proteomics.

I am also a ski teacher as a hobby.