This is part of a series of workflows to annotate a genome, tagged with TSI-annotation
.
These workflows are based on command-line code by Luke Silver, converted into Galaxy Australia workflows.
The workflows can be run in this order:
- Repeat masking
- RNAseq QC and read trimming
- Find transcripts
- Combine transcripts
- Extract transcripts
- Convert formats
- Fgenesh annotation
Items
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Convert formats - TSI
- Added 3 months ago -
Fgenesh annotation -TSI
- Added 3 months ago -
Extract transcripts - TSI
- Added 3 months ago -
Combine transcripts - TSI
- Added 3 months ago -
Find transcripts - TSI
- Added 3 months ago -
QC and trimming of RNAseq reads - TSI
- Added 3 months ago -
Repeat masking - TSI
- Added 3 months ago
![help](/assets/famfamfam_silk/information-8cfe563be76fb11b27c8ba778f5d40ce6800b244d6ca58ef6e9973308efbe534.png)
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Created: 8th May 2024 at 08:30
Last updated: 8th May 2024 at 08:36
![help](/assets/famfamfam_silk/information-8cfe563be76fb11b27c8ba778f5d40ce6800b244d6ca58ef6e9973308efbe534.png)
![help](/assets/famfamfam_silk/information-8cfe563be76fb11b27c8ba778f5d40ce6800b244d6ca58ef6e9973308efbe534.png)
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