Music: Pre-grouping cell types 1.0
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Run on GalaxyWorkflow for the second half of the "Bulk RNA Deconvolution with MuSiC" tutorial.
Implements the "Estimation of cell type proportions with pre-grouping of cell types" section
Associated Tutorial
This workflows is part of the tutorial Bulk RNA Deconvolution with MuSiC, available in the GTN
Features
- Includes Galaxy Workflow Tests
- Includes a Galaxy Workflow Report
- Uses Galaxy Workflow Comments
Thanks to...
Workflow Author(s): Morgan Howells
Tutorial Author(s): Mehmet Tekman, Wendi Bacon
Tutorial Contributor(s): Morgan Howells, Helena Rasche, Mehmet Tekman, Saskia Hiltemann, Wendi Bacon, Björn Grüning
Steps
| ID | Name | Description |
|---|---|---|
| 6 | Construct Expression Set Object | toolshed.g2.bx.psu.edu/repos/bgruening/music_construct_eset/music_construct_eset/0.1.1+galaxy4 |
| 7 | Construct Expression Set Object | toolshed.g2.bx.psu.edu/repos/bgruening/music_construct_eset/music_construct_eset/0.1.1+galaxy4 |
| 8 | MuSiC Deconvolution | toolshed.g2.bx.psu.edu/repos/bgruening/music_deconvolution/music_deconvolution/0.1.1+galaxy4 |
| 9 | MuSiC Deconvolution | toolshed.g2.bx.psu.edu/repos/bgruening/music_deconvolution/music_deconvolution/0.1.1+galaxy4 |
Version History
master
Creators and Submitter
Views: 2171 Downloads: 307 Runs: 0
Created: 2nd Jun 2025 at 10:58
AttributionsNone
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Organizations: Galaxy
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