WF4_Quantitation_Workflow 1.0
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Download RO-Crate
Run on GalaxyQuantification using the MaxQuant tool
Associated Tutorial
This workflows is part of the tutorial Clinical Metaproteomics 4: Quantitation, available in the GTN
Thanks to...
Workflow Author(s): Subina Mehta
Tutorial Author(s): Subina Mehta, Katherine Do, Dechen Bhuming
Tutorial Contributor(s): Pratik Jagtap, Timothy J. Griffin, Bérénice Batut, Helena Rasche, Saskia Hiltemann, Björn Grüning, Subina Mehta
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| Experimental-Design Discovery MaxQuant | Experimental-Design Discovery MaxQuant | n/a |
|
| Input Raw-files | Input Raw-files | n/a |
|
| Quantitation_Database-For-MaxQuant | Quantitation_Database-For-MaxQuant | n/a |
|
Steps
| ID | Name | Description |
|---|---|---|
| 3 | MaxQuant | toolshed.g2.bx.psu.edu/repos/galaxyp/maxquant/maxquant/1.6.17.0+galaxy4 |
| 4 | Select | Grep1 |
| 5 | Select | Grep1 |
| 6 | Cut | Cut1 |
| 7 | Cut | Cut1 |
| 8 | Group | Grouping1 |
| 9 | Group | Grouping1 |
Version History
master
Creators and Submitter
Views: 216 Downloads: 34 Runs: 0
Created: 2nd Jun 2025 at 10:52
Tags AttributionsNone
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Teams: Galaxy Training Network
Organizations: Galaxy
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