WF4_Quantitation_Workflow
1.0

Workflow Type: Galaxy

Quantification using the MaxQuant tool

Associated Tutorial

This workflows is part of the tutorial Clinical Metaproteomics 4: Quantitation, available in the GTN

Thanks to...

Workflow Author(s): Subina Mehta

Tutorial Author(s): Subina Mehta, Katherine Do, Dechen Bhuming

Tutorial Contributor(s): Pratik Jagtap, Timothy J. Griffin, Bérénice Batut, Helena Rasche, Saskia Hiltemann, Björn Grüning, Subina Mehta

gtn star logo followed by the word workflows

Inputs

ID Name Description Type
Experimental-Design Discovery MaxQuant Experimental-Design Discovery MaxQuant n/a
  • File
Input Raw-files Input Raw-files n/a
  • File[]
Quantitation_Database-For-MaxQuant Quantitation_Database-For-MaxQuant n/a
  • File

Steps

ID Name Description
3 MaxQuant toolshed.g2.bx.psu.edu/repos/galaxyp/maxquant/maxquant/1.6.17.0+galaxy4
4 Select Grep1
5 Select Grep1
6 Cut Cut1
7 Cut Cut1
8 Group Grouping1
9 Group Grouping1

Version History

1.0 (earliest) Created 2nd Jun 2025 at 10:52 by GTN Bot

Added/updated 4 files


Open master 421d3b4
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Views: 43   Downloads: 4   Runs: 0

Created: 2nd Jun 2025 at 10:52

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Total size: 69.5 KB
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