Workflow Type: Galaxy
Annotating a protein list identified by LC-MS/MS experiments
Associated Tutorial
This workflows is part of the tutorial Annotating a protein list identified by LC-MS/MS experiments, available in the GTN
Thanks to...
Tutorial Author(s): Valentin Loux, Florence Combes, David Christiany, Yves Vandenbrouck
Steps
ID | Name | Description |
---|---|---|
3 | Build tissue-specific expression dataset | toolshed.g2.bx.psu.edu/repos/proteore/proteore_tissue_specific_expression_data/retrieve_from_hpa/2019.02.27 |
4 | Filter by keywords and/or numerical value | toolshed.g2.bx.psu.edu/repos/proteore/proteore_filter_keywords_values/MQoutputfilter/2019.03.11 |
5 | ID Converter | toolshed.g2.bx.psu.edu/repos/proteore/proteore_id_converter/IDconverter/2019.03.07 |
6 | ID Converter | toolshed.g2.bx.psu.edu/repos/proteore/proteore_id_converter/IDconverter/2019.03.07 |
7 | Venn diagram | toolshed.g2.bx.psu.edu/repos/proteore/proteore_venn_diagram/Jvenn/2019.02.21 |
8 | Add expression data | toolshed.g2.bx.psu.edu/repos/proteore/proteore_expression_rnaseq_abbased/rna_abbased_data/2019.03.07 |
9 | Filter by keywords and/or numerical value | toolshed.g2.bx.psu.edu/repos/proteore/proteore_filter_keywords_values/MQoutputfilter/2019.03.11 |
10 | GO terms classification and enrichment analysis | toolshed.g2.bx.psu.edu/repos/proteore/proteore_clusterprofiler/cluter_profiler/2019.02.18 |
11 | Query pathway database | toolshed.g2.bx.psu.edu/repos/proteore/proteore_reactome/reactome_analysis/2019.03.05 |
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Created: 2nd Jun 2025 at 10:52


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