Teams

Here we introduce a scientific workflow implementing several open-source software executed by Parsl parallel scripting language in an high-performance computing environment. We have applied the workflow to a single-cardiomyocyte RNA-seq data retrieved from Gene Expression Omnibus database. The workflow allows for the analysis (alignment, QC, sort and count reads, statistics generation) of raw RNA-seq data and seamless integration of differential expression results into a configurable script code. ...

Personalized Medicine Center of Excellence

It focuses on the construction of DigitalTwins for the prototyping of complex manufactured objects integrating state-of-the-art adaptive solvers with machine learning and data-mining, contributing to the Industry 4.0 vision.

It develops innovative adaptive workflows for climate and for the study of Tropical Cyclones (TC) in the context of the CMIP6 experiment, including in-situ analytics.

It explores the modelling of natural catastrophes – in particular, earthquakes and their associated tsunamis shortly after such an event is recorded.

An open-source bioinformatics community, based in Japan. Members include academic and private companies. Working with the topics such as workflow sharing and cloud computing infrastructure.

French Biodiversity e-infrastructure