Teams

FAS Research Computing department at Harvard University

Dev team for Hecatomb

The guidance system HELIPORT aims to make the entire life cycle of a project at the HZDR findable, accessible, interoperable and reusable according to the FAIR principles, mentioned below. In particular, our data management solution deals with the areas from the generation of the data to the publication of primary research data, the workflows carried out and the actual research results. For this purpose, a concept was developed which shows the various essential components and their connections. ...

MGnify is EMBL-EBI's metagenomics resource. EMBL-EBI are one of the 11 HoloFood partners, and are responsible for the analysis of metagenomic and microbial datasets from the project.

In view of the complexity in modeling phylogenetic network experiments, the present work introduces a workflow for phylogenetic network analyses coupled to be executed in High-Performance Computing (HPC) environments. The workflow aims to integrate well-established software, pipelines and scripts, implementing a challenging task since these tools do not consistently profit from the HPC environment, leading to an increase in the expected makespan and idle computing resources.

The Hurwitz Lab was established in August, 2014 at the University of Arizona in the Department of Biosystems Engineering. Our lab focuses on large-scale –omics datasets, high-throughput computing, and big data analytics. We leverage these technologies to answer questions related to the relationship between microbes, their hosts, and the environment.

The Instituto Astrofísica Andalucía (IAA) is an institute belonging to the Consejo Superior de Investigaciones Científicas (CSIC) in Granada - Andalucía. The activities of the IAA - CSIC are related to research in the field of astrophysics and the development of instrumentation for telescopes and spacecraft.

Workflows from the Industrial Biotechnology Innovation and Synthetic Biology Accelerator (IBISBA 1.0) project, which is funded by the European Union Horizon 2020 program INRAIA-02 under grant agreement 730976.

The workflows also appear on https://hub.ibisba.eu