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The Common Workflow Language (CWL) is an open standard for describing analysis workflows and tools in a way that makes them portable and scalable across a variety of software and hardware environments, from workstations to cluster, cloud, and high performance computing (HPC) environments. CWL is designed to meet the needs of data-intensive science, such as Bioinformatics, Medical Imaging, Astronomy, High Energy Physics, and Machine Learning.CWL is developed by a multi-vendor working group consisting ...

Space: Independent Teams

Public web page: https://www.commonwl.org/

Start date: 11th Jul 2014

Nextflow pipelines for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), with a focus on ncov2019

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CWL workflows related to virus genomics with focus on SARS-CoV-2.

EJPRD WP13 case-studies workflows from phase 1.

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Space: This Team is not associated with a Space

Public web page: Not specified

An integrative analysis pipeline of genomic and transcriptomic human data for disentangling the genetic origin of a rare-disease in the context of the European Open Science Cloud.

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