SARS-COV2 version of the V-Pipe workflow Version 1
Download RO CrateA version of V-pipe (analysis of next generation sequencing (NGS) data from viral pathogens) specifically adapted to analyze high-throughput sequencing data of SARS-CoV-2.
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Created: 10th Apr 2020 at 14:46
Last updated: 27th May 2020 at 13:03
Last used: 28th Feb 2021 at 18:45
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Version 1 Created 10th Apr 2020 at 14:46 by Hervé Ménager
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Teams: V-Pipe, GalaxyProject SARS-CoV-2, nf-core viralrecon
Organizations: Institut Pasteur
https://orcid.org/0000-0002-7552-1009
Teams: V-Pipe
Organizations: SIB - Swiss Institute of Bioinformatics
https://orcid.org/0000-0002-7561-0810
Medical doctor and bioinformatician
Developer from the Swiss Institute of Bioinformatics (SIB)
Working at the Computational Biology Group (CBG) of ETH Zurich.
Diplom in Medicine.
MSc in Bioinformatics and Proteomics.
I am also a ski teacher as a hobby.
The goal of COVID-19-Biohackathon 2020 (COVID-19-BH20) is to develop and gather computational tools that can be useful for studying the biology of the virus and the disease.
The COVID-19 Programme in Workflow Hub aims to gather workflows for the analysis of COVID-19 molecular biology data and their metadata. In this programme, all workflows and their metadata will be curated and made interoperable, reusable and reproducible. All workflows and their metadata will be easily accessible to everyone
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Teams: Connor Lab, GalaxyProject SARS-CoV-2, InSaFLU, nf-core viralrecon, CWL workflow SARS-CoV-2, V-Pipe, Test team
Web page: https://github.com/virtual-biohackathons/covid-19-bh20
Space: COVID-19 Biohackathon
Public web page: Not specified
