Genomics - Recombination and selection analysis
Version 1

Workflow Type: Galaxy

This workflow employs a recombination detection algorithm (GARD) developed by Kosakovsky Pond et al. and implemented in the hyphy package. More info can be found at https://covid19.galaxyproject.org/genomics/

Inputs

ID Name Description Type
0_Input Dataset n/a n/a
  • File

Steps

ID Name Description
1_transeq n/a n/a
2_MAFFT n/a n/a
3_tranalign n/a n/a
4_FASTTREE n/a n/a
5_HyPhy-GARD n/a n/a
6_HyPhy-aBSREL n/a n/a
Total size: 22.7 KB
help Creators and Submitter
Creators
  • Dannon Baker
  • Marius van den Beek
  • Dave Bouvier
  • John Chilton
  • Nate Coraor
  • Frederik Coppens
  • Bert Droesbeke
  • Ignacio Eguinoa
  • Simon Gladman
  • Björn Grüning
  • Delphine Larivière
  • Gildas Le Corguillé
  • Andrew Lonie
  • Nicholas Keener
  • Sergei Kosakovsky Pond
  • Wolfgang Maier
  • Anton Nekrutenko
  • James Taylor
  • Steven Weaver
Submitter
License
Activity

Views: 1075   Downloads: 43

Created: 10th Apr 2020 at 14:30

Last used: 27th Jan 2022 at 05:54

help Tags
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Version History

Version 1 (earliest) Created 10th Apr 2020 at 14:30 by Bert Droesbeke

Added/updated 3 files


Open master 5c9636b

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