Genomics - Recombination and selection analysis
Version 1

This workflow employs a recombination detection algorithm (GARD) developed by Kosakovsky Pond et al. and implemented in the hyphy package. More info can be found at https://covid19.galaxyproject.org/genomics/

Inputs

ID Name Description Type
#main/0_Input Dataset n/a n/a File

Steps

ID Name Description
#main/1_transeq
#main/2_MAFFT
#main/3_tranalign
#main/4_FASTTREE
#main/5_HyPhy-GARD
#main/6_HyPhy-aBSREL
help Creators and Submitter
Creators
  • Dannon Baker
  • Marius van den Beek
  • Dave Bouvier
  • John Chilton
  • Nate Coraor
  • Frederik Coppens
  • Bert Droesbeke
  • Ignacio Eguinoa
  • Simon Gladman
  • Björn Grüning
  • Delphine Larivière
  • Gildas Le Corguillé
  • Andrew Lonie
  • Nicholas Keener
  • Sergei Kosakovsky Pond
  • Wolfgang Maier
  • Anton Nekrutenko
  • James Taylor
  • Steven Weaver
Submitter
License
Activity

Views: 276   Downloads: 12

Created: 10th Apr 2020 at 14:30

Last used: 20th Sep 2020 at 06:56

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