1 item tagged with 'bowtie2'.
Workflow for NonSpliced RNAseq data with multiple aligners.
- FastQC (control)
- fastp (trimming)
- bowtie2 (read mapping)
- featurecounts (transcript read counts)
- kallisto (transcript [pseudo]counts)
Type: Common Workflow Language
Creators: Bart Nijsse, Jasper Koehorst
Submitter: Bart Nijsse
Created: 24th Nov 2020 at 11:05, Last updated: 8th Jun 2021 at 08:32
Views: 1582, Downloads: 49