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Nextflow70
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Metagenomics8
rna8
rna-seq7
nanopore6
Proteomics5
single-cell5
variant-calling5
Assembly4
illumina4
microbiome4
openms4
10x-genomics3
10xgenomics3
ATAC-seq3
DNA3
Genomics3
image-processing3
mass-spectrometry3
taxonomic-classification3
taxonomic-profiling3
Transcriptomics3
adna2
Annotation2
ChIP-seq2
demultiplexing2
denovo-assembly2
differential-expression2
eDNA2
FASTQ2
GATK42
genome-assembly2
long-read-sequencing2
long-reads2
Metabarcoding2
nanopore-sequencing2
NGS2
peak-calling2
proteogenomics2
quantification2
shotgun2
spatial2
star-solo2
Virus2
16S1
18S1
airr1
alevin1
Alignment1
alphafold21
alternative-splicing1
amp1
Amplicon1
amplicon-sequencing1
ampliconarchitect1
ampliconsuite1
AMR1
ancient-dna1
ancient-dna-analysis1
ancientdna1
antibiotic-resistance1
antimicrobial-peptides1
antimicrobial-resistance-genes1
arg1
ARTIC1
atac1
b-cell1
bacteria1
bacterial1
bacterial-genome-analysis1
bacterial-genomes1
bamtofastq1
bases2fastq1
bcl2fastq1
bgc1
binning1
biosynthetic-gene-clusters1
bisulfite-sequencing1
bustools1
BWA-mem1
bwa-mem21
cage1
cage-seq1
cageseq-data1
cancer1
Cellranger1
chimeric-alignment1
ChIP1
chromatin-accessibiity1
chromatin-immunoprecipitation1
chromosome-conformation-capture1
CIRCexplorer21
circle-seq1
circrna1
circRNA_finder1
circular1
CIRIquant1
Classification1
clip1
clip-seq1
Consensus1
contigs1
Conversion1
coprolite1
cosmic1
covid-191
covid191
cramtofastq1
crispr1
crispr-analysis1
crispr-cas1
ctat1
cutandrun1
cutandrun-seq1
cutandtag1
cutandtag-seq1
cytometry1
data-independent-proteomics1
DCC1
ddbj1
de-identification1
decontamination1
deep-variant1
demo1
denovo1
deseq21
dia1
dia-proteomics1
diagnostics1
differential expression1
differential-abundance1
dna-methylation1
download1
dualrna-seq1
eccdna1
ecdna1
elementbiosciences1
em-seq1
ena1
epigenome1
Epigenomics1
epitope1
epitope-prediction1
eukaryotes1
evolution1
evolutionary-tree1
extrachromosomal-circular-dna1
facs-sorting1
FastQC1
filter1
find_circ1
fish1
function1
fusion1
fusion-genes1
gene-expression1
gene-fusion1
genome1
genomics-visualization1
geo1
Germline1
ggbio1
gnomad1
google1
gro-seq1
gsea1
Hi-C1
HiC1
hicar1
hla1
hla-typing1
horizontal-gene-transfer1
host-pathogen1
hybrid-assembly1
identification1
image-analysis1
image-segmentation1
imaging1
immcantation1
immunology1
immunorepertoire1
iontorrent1
isoseq1
isoseq-31
ITS1
k-mer1
kallisto1
kmer1
kmer-counting1
kmer-frequency-count1
kraken21
krona1
label-free-quantification1
lfq1
limma1
linked-reads1
macs21
mapping1
MapSplice1
MARS-seq1
mass-spec1
Metabolomics1
metagenomes1
metatranscriptomics1
methyl-seq1
mhc1
mhc-binding-prediction1
microarray1
microscopy1
minimal-example1
miRanda1
mirna prediction1
mnase-seq1
molecular-pixelation1
molecularcartography1
ms11
ms21
Multi-omics1
MultiQC1
nanostring1
nanostringnorm1
nascent1
natural-products1
Nextflow1
nucleosome1
nucleosome-maps1
nucleosome-positioning1
ONT1
optitype1
oxford-nanopore1
pacbio1
pangenome1
pathogen1
pathogen-genomics1
pbat1
peptides1
personalized-medicine1
phylogenetic-placement1
phylogenetics1
phylogeny1
pixelator1
pixelgen-technologies1
population-genetics1
pre-processing1
pro-seq1
Profiling1
prokaryotes1
protein-databases1
protein-fold-prediction1
protein-folding1
protein-sequences1
protein-structure1
proteins1
pypgatk1
QC1
qiime21
quantseq1
rare-disease1
readmapping1
repseq1
rna-rbp-interactions1
RNASEQ1
rrbs1
rrna1
SAMTools1
SARS-CoV-21
screening1
secondary-metabolites1
Segemehl1
Segmentation1
sequence-classification1
shiny1
short-reads1
single-cell-omics1
single-cell-rna-seq1
slamseq1
small-rna1
smrna-seq1
snv1
Somatic1
spatial-transcriptomics1
splicing1
sra1
st1
structural-variants1
Supernova1
synapse1
tama1
target-panels1
TargetScan1
taxonomies1
taxonomy-assignment1
tidyverse1
tmt1
training1
transcription1
transcriptional-dynamics1
transcriptome1
tree1
tss1
ultra1
umi1
umis1
unique-molecular-identifier1
variant-annotation1
viral1
viral-integration1
viruses1
virusintegrationfinder1
visium1
wes1
WGS1
whole-exome-sequencing1
whole-genome-sequencing1
worflow1
More...
Team
nf-core70
Space
nf-core70
Creator
Barry Digby1
70
Workflows visible to you, out of a total of 70
Nascent Transcription Processing Pipeline
A Nanostring nCounter analysis pipeline
A pipeline to demultiplex, QC and map Nanopore data
MNase-seq analysis pipeline using BWA and DANPOS2.
Identify and quantify peptides from mass spectrometry raw data
Assembly and annotation of metatranscriptomic data, both prokaryotic and eukaryotic
Assembly, binning and annotation of metagenomes
Type: Nextflow
Creators: No author provided, Hadrien Gourlé, Daniel Straub, Sabrina Krakau
Submitter: WorkflowHub Bot
Deprecated
Compare DNA/RNA/protein sequences on k-mer content
Image Mass Cytometry analysis pipeline.