Workflows
What is a Workflow?Filters
Query
Created At
Updated At
Tool
BRAKER11
HISAT21
RepeatMasker1
RepeatModeler1
Workflow type
Snakemake1
Tag
Annotation1
Biodiversity1
Genomics1
Transcriptomics1
Submitter
Tom Brown1
Team
ERGA Annotation1
Space
ERGA1
Creator
Sagane Joye-Dind1
Collection
Biodiversity & ecology workflows1
Topic annotations
Gene structure1
Gene transcripts1
Genomics1
Scientific disciplines
Biochemistry, Genetics and Molecular Biology1
1
Workflow visible to you, out of a total of 1
ERGA Protein-coding gene annotation workflow.
Adapted from the work of Sagane Joye:
https://github.com/sdind/genome_annotation_workflow
Prerequisites
The following programs are required to run the workflow and the listed version were tested. It should be noted that older versions of snakemake are not compatible with newer versions of singularity as is noted here: https://github.com/nextflow-io/nextflow/issues/1659.
conda v 23.7.3
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