Workflows
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Created At
Updated At
Workflow type
Galaxy6
Submitter
Cristóbal Gallardo6
Team
usegalaxy-eu6
Space
Independent Teams6
Creator
Delphine Lariviere6
Maturity
Work-in-progress4
6
Workflows visible to you, out of a total of 6
Performs Long Read assembly using PacBio data and Hifiasm. Part of VGP assembly pipeline. This workflow generate a phased assembly.
Work-in-progress
Performs scaffolding using HiC Data. Part of VGP assembly pipeline. The scaffolding can be performed on long read assembly contigs or on scaffolds (e.g.: Bionano scaffolds).
Performs scaffolding using Bionano Data. Part of VGP assembly pipeline.
Work-in-progress
Purge Phased assembly of duplications and overlaps. Include purge steps for Primary and Alternate assemblies.
Work-in-progress
Performs Long Read assembly using PacBio data and Hifiasm. Part of VGP assembly pipeline. This workflow generate a phased assembly.
Work-in-progress
Create Meryl Database used for the estimation of assembly parameters and quality control with Merqury. Part of the VGP pipeline.
