Workflows
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Workflow type
Nextflow1
Tag
Annotation1
annotsv1
Bioinformatics1
Genomics1
manta1
Nextflow1
rare diseases1
smoove1
structural variants1
survivor1
tiddit1
variant_calling1
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Submitter
Sarah Beecroft1
Space
Australian BioCommons1
Creator
Sarah Beecroft1
Tracy Chew13
Rosemarie Sadsad9
Georgina Samaha8
Cali Willet4
Nandan Deshpande1
Topic annotations
Bioinformatics1
DNA mutation1
Genomics1
Structural genomics1
Whole genome sequencing1
GermlineStructuralV-nf is a pipeline for identifying structural variant events in human Illumina short read whole genome sequence data. GermlineStructuralV-nf identifies structural variant and copy number events from BAM files using Manta, Smoove, and TIDDIT. Variants are then merged using SURVIVOR, ...
Type: Nextflow
Creators: Georgina Samaha, Marina Kennerson, Tracy Chew, Sarah Beecroft
Submitter: Georgina Samaha
