average-bigwig-between-replicates/main
v0.2 (latest)

v0.2 (latest)

v0.1 (earliest)

Workflow Type: Galaxy

We assume the identifiers of the input list are like: sample_name_replicateID. The identifiers of the output list will be: sample_name

SEEK ID: https://workflowhub.eu/workflows/579?version=2

Inputs

ID	Name	Description	Type
Bigwig to average	#main/Bigwig to average	We assume the identifiers are like: sample_name_replicateID	array containing File
bin_size	#main/bin_size	Bin size for normalized bigwig (usually 5bp is sufficient for RNA-seq and 50bp for ChIP/CUTandRUN/ATAC)	int

ID	Name	Description
2	Apply rules	__APPLY_RULES__
3	average bigwigs from different replicates	toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_bigwig_average/deeptools_bigwig_average/3.5.4+galaxy0

ID	Name	Description	Type
average_bigwigs	#main/average_bigwigs	n/a	File

Updated to v0.2

Frozen v0.2 4cf3bf5

Updated to v0.1

Frozen v0.1 4623eaa

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Created: 27th Sep 2023 at 03:01