1 item tagged with 'CUTnRUN'.
CUT&RUN (and CUT&TAG) Workflow
- The workflow needs a single input which is a list of dataset pairs of fastqsanger.
- adapter sequences: this depends on the library preparation. Usually CUT&RUN is Truseq and CUT&TAG is Nextera. If you don't know, use FastQC to determine if it is Truseq or Nextera
- reference_genome: this field will be adapted to the genomes available for bowtie2
- effective_genome_size: this is used by macs2 and may be entered ...
Creator: Lucille Delisle
Submitter: WorkflowHub Bot
Created: 20th Oct 2022 at 03:01, Last updated: 30th Nov 2022 at 03:01