Workflows
What is a Workflow?Filters
Query
Created At
Updated At
Workflow type
Galaxy2
Submitter
Anton Nekrutenko2
Team
usegalaxy-eu2
Space
Independent Teams2
Operation annotations
Virology2
Maturity
Stable1
Generic consensus building
This workflow generates consensus sequences using a list of variants generated by Variant Calling Workflow.
The workflow accepts a single input:
- A collection of VCF files
The workflow produces a single output:
- Consensus sequence for each input VCF file
The workflow can be accessed at usegalaxy.org
Stable
Generic variation analysis reporting
This workflow generates reports from a list of variants generated by Variant Calling Workflow.
The workflow accepts a single input:
- A collection of VCF files
The workflow produces two outputs (format description below):
- A list of variants grouped by Sample
- A list of variants grouped by Variant
Here is example of output by sample. In this table all varinats in all samples are epxlicitrly listed:
| Sample | ...