What is a Workflow?
2 Workflows visible to you, out of a total of 2

RNAseq workflow UMG: Here we introduce a scientific workflow implementing several open-source software executed by Galaxy parallel scripting language in an high-performance computing environment. We have applied the workflow to a single-cardiomyocyte RNA-seq data retrieved from Gene Expression Omnibus database. The workflow allows for the analysis (alignment, QC, sort and count reads, statistics generation) of raw RNA-seq data and seamless integration of differential expression results into a ...

Type: Galaxy

Creator: Kary Ocaña

Submitter: Kary Ocaña

DOI: 10.48546/workflowhub.workflow.412.1

RNA-seq Scientific Workflow

Workflow for RNA sequencing using the Parallel Scripting Library - Parsl.

Reference: Cruz, L., Coelho, M., Terra, R., Carvalho, D., Gadelha, L., Osthoff, C., & Ocaña, K. (2021). Workflows Científicos de RNA-Seq em Ambientes Distribuídos de Alto Desempenho: Otimização de Desempenho e Análises de Dados de Expressão Diferencial de Genes. In Anais do XV Brazilian e-Science Workshop, p. 57-64. Porto Alegre: SBC. DOI: ...

Type: Unrecognized workflow type

Creators: Lucas Cruz, Luiz Gadelha, Kary Ocaña

Submitter: Kary Ocaña

DOI: 10.48546/workflowhub.workflow.411.1

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