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Independent Teams298 ELIXIR11 COVID-19 Biohackathon10 EOSC-Life6 Biodiversity Genomics Europe (BGE)4 Galaxy4 BioExcel3 DISSCo - Distributed System of Scientific Collections3 ERGA2 BeYond-COVID (BY-COVID)1 ELIXIR Belgium1 BioDT1 HELIPORT1 eFlows4HPC1 AI4Life Space1 EIRENE-CZ1 More...

IBISBA Workflows22 EJPRD WP13 case-studies workflows11 usegalaxy-eu10 Euro-BioImaging10 EuroScienceGateway8 GalaxyProject SARS-CoV-27 Snakemake-Workflows7 Scipion CNB7 UX trial team6 EGA6 SeBiMER5 OME5 OpenEBench5 Defragmentation TS5 NBIS5 ELIXIR Proteomics5 NGFF Tools5 nf-core viralrecon4 Galaxy Training Network4 SARS-CoV-2 Data Hubs4 Common Workflow Language (CWL) community4 CO2MICS Lab4 BioBB Building Blocks3 Integrated and Urban Plant Pathology Laboratory3 EOSC-Life - Demonstrator 7: Rare Diseases3 iPC: individualizedPaediatricCure3 EOSC-Life WP33 ODA3 TransBioNet3 Specimen Data Refinery3 ELIXIR Training3 Medizinisches Proteom-Center, Medical Bioinformatics3 Air Quality Prediction3 TRE-FX3 BSC-CES3 Metabolomics-Reproducibility3 Biodiversity Genomics Europe (general)3 UNLOCK2 Galaxy Climate2 PNDB2 MOLGENIS2 MAB - ATGC2 Applied Computational Biology at IEG/HMGU2 INFRAFRONTIER workflows2 FAIR Computational Workflows2 CINECA2 Pitagora-Network2 AGRF BIO2 EU-Openscreen2 X-omics2 CAPSID2 Seq4AMR2 KircherLab2 GEMS at MLZ2 Vertebrate Genomes Pipelines in Galaxy2 Computational Science at HZDR2 CSFG2 Polygenic Score Catalog2 EMBL-CBA2 EBP-Nor2 Bioinformatics Laboratory for Genomics and Biodiversity (LBGB)2 BY-COVID (general)2 Nextflow4Metabolomics2 Institute for Human Genetics and Genomic Medicine Aachen2 ELIXIR Metabolomics2 ErasmusMC Clinical Bioinformatics2 CWL workflow SARS-CoV-21 V-Pipe1 MGnify1 Ewastools1 Test team1 NMR Workflow1 NanoGalaxy1 IMBforge1 COVID-19 PubSeq: Public SARS-CoV-2 Sequence Resource1 LBI-RUD1 Nick-test-team1 Italy-Covid-data-Portal1 lmjxteam21 virAnnot pipeline1 Ay Lab1 Harkany Lab1 BioExcel Best Practice Guides1 Testing1 IAA-CSIC1 Probabilistic graphical models1 GenX1 IPK BIT1 FAME1 CHU Limoges - UF9481 Bioinformatique / CNR Herpesvirus1 Quadram Institute Bioscience - Bioinformatics1 HecatombDevelopment1 Institute of Human Genetics1 Testing RO Crates1 Test Team1 RECETOX1 Bioinformatics and Biostatistics (BIO2 ) Core1 VIB Bioinformatics Core1 CRC Cohort1 ICAN1 MustafaVoh1 Single Cell Unit1 CO-Graph1 emo-bon1 TestEMBL-EBIOntology1 Toxicology community1 Workflows Australia1 ELIXIR Belgium1 usegalaxy.be workflows1 URGI1 Size Inc1 GA-VirReport Team1 The Boucher Lab1 pyiron1 Edinburgh Genomics1 Phytoplankton Analysis1 Workflow registry test1 Read2Map1 SKM31 ParslRNA-Seq: an efficient and scalable RNAseq analysis workflow for studies of differentiated gene expression1 de.NBI Cloud1 Meta-NanoSim1 ILVO Plant Health1 EMERGEN-BIOINFO1 Apis-wings1 BCCM_ULC1 Dessimoz Lab1 TRON gGmbH1 Big data in biomedicine1 BioDT Use Case 4.1.1.2 Ecosystem services1 BioDT Use Case 4.1.1.1 Biodiversity dynamics1 BioDT Use Case 4.1.2.2 DNA detected biodiversity, poorly known habitats1 BioDT Use Case 4.1.2.1 Crop wild relatives and genetic resources for food security1 BioDT Use Case 4.1.3.1 Invasive species1 BioDT Use Case 4.1.3.2 Endangered species1 BioDT Use Case 4.1.4.1 Disease outbreaks1 BioDT Use Case 4.1.4.2 Pollinators1 BioDT additional pipelines1 MISTIC1 Guigó lab1 Statistical genetics1 Delineating Regions-of-interest for Mass Spectrometry Imaging by Multimodally Corroborated Spatial Segmentation1 WES1 Bioinformatics Unit @ CRG1 Bioinformatics Innovation Lab1 Black Ochre Data Labs1 Zavolan Lab1 Team Cardio1 Bioinformatics workflows for life science1 Helmholtz Scientific Project Workflow Platform1 Workflows for geographic science1 Pacific-deep-sea-sponges-microbiome1 BY-COVID Baseline Use Case: SARS-CoV-2 Vaccine(s) effectiveness in preventing SARS-CoV-2 infection1 SNAKE1 Katdetectr1 ERGA Assembly1 INFRAFRONTIER GmbH1 PerMedCoE1 EOSC-Life WP3 OC Team, cross RI project1 ANSES-Ploufragan1 SANBI Pathogen Bioinformatics1 Biodata Analysis Group1 DeSci Labs1 Erasmus MC - Viroscience Bioinformatics1 ARA-dev1 Mendel Centre for Plant Genomics and Proteomics1 Metagenomic tools1 WorkflowEng1 bpm1 ERGA Annotation1 scNTImpute1 Systems Biotechnology laboratory1 Cimorgh IT solutions1 MLme: Machine Learning Made Easy1 Hurwitz Lab1 Dioscuri TDA1 System Biotechnology laboratory1 yPublish - Bioinfo tools1 NIH CFDE Playbook Workflow Partnership1 MMV-Lab1 Evaluation of Swin Transformer and knowledge transfer for denoising of super-resolution structured illumination microscopy data1 multi-analysis dFC1 CholGen1 RNA group1 Plant Genomes Pipelines in Galaxy1 Pathogen Genomic Laboratory1 Chemical Data Lab1 JiangLab1 Pangenome database project1 HP2NET - Framework for construction of phylogenetic networks on High Performance Computing (HPC) environment1 Center for Open Bioimage Analysis1 COMPSs Tutorials1 Generalized Open-Source Workflows for Atomistic Molecular Dynamics Simulations of Viral Helicases1 Historical DNA genome skimming1 AI4Life OC1 QCDIS1 Peter Menzel's Team1 NHM Clark group1 ESRF Workflow System (Ewoks)1 Kalbe Bioinformatics1 GBCS1 CEMCOF1 ELIXIR Tools platform1 Jackson Laboratory NGS-Ops1 Schwartz Lab1 BRAIN - Biomedical Research on Adult Intracranial Neoplasms1 Cancer Therapeutics and Drug Safety1 RECETOX SpecDatRI1 Deepdefense1 Mid-Ohio Regional Planning Commission1 MGSSB1 FengTaoSMU1 Plant-Food-Research-Open1 KrauthammerLab1 Geo Workflows1 grassland pDT1 FunGIALab1 CRIM - Computer Research Institute of Montréal1 Medvedeva Lab1 Metagenlab1 FAIR-EASE1 Protein-protein and protein-nucleic acid binding site prediction research1 Culhane Lab1 IDUN - Drug Delivery and Sensing1 Edge Computing DAG Task Scheduling Research Group1 Stratum corneum nanotexture feature detection using deep learning and spatial analysis: a non-invasive tool for skin barrier assessment1 COPO1 Taudière group1 interTwin1 fluid flow modeling1 EnrichDO1 WorkflowResearch1 Application Security - Test Crypt4GH solutions1 More...

Unspecified16 The University of Manchester12 Spanish National Research Council (CSIC)10 Euro-BioImaging10 Barcelona Supercomputing Center (BSC-CNS)9 EJP-RD8 EMBL-EBI7 Erasmus University Medical Centre6 IFREMER6 EGA6 INRAe5 European Galaxy Team5 NBIS – National Bioinformatics Infrastructure Sweden5 Centre National de la Recherche Scientifique (CNRS)4 Albert-Ludwigs-Universität Freiburg3 French Museum of Natural History3 Liege university3 Maastricht University3 MMODA3 Galaxy3 Masaryk University3 European Molecular Biology Laboratory3 ELIXIR Belgium2 IRISA2 UNLOCK2 Medical University of Vienna2 University Medical Center Groningen2 University of Basel2 Biomedical Research Foundation (BRFAA) of the Academy of Athens2 Harvard University2 Helmholtz Zentrum München2 INFRAFRONTIER GmbH2 University of Dundee2 ELIXIR-UK2 The Natural History Museum London2 The University of Melbourne2 Medical Proteome Center2 Fraunhofer Institute for Translational Medicine and Pharmacology ITMP2 X-omics2 EMBL2 CNRS - Centre Est2 ELIXIR2 National Laboratory of Scientific Computing2 Berlin Institute of Health at Charité - Universitätsmedizin Berlin2 Helmholtz Zentrum Hereon2 Open Microscopy Enronment (OME)2 Genoscope2 University of Nottingham2 EPFL2 University Hospital Aachen2 Institut Pasteur1 JNU - School of Computational and Integrative Sciences (SC&IS)1 Earlham Institute1 Australian BioCommons1 University of Bradford1 CRS41 CIRMMP1 gx-climate1 Institute of Molecular Biology1 VU Amsterdam1 LBI-RUD1 ELIXIR-IT1 lmjxteam21 La Jolla Institute of Immunology1 ff1 GenX1 University of Duisburg-Essen1 IPK Gatersleben1 e-NIOS1 FAME1 CHU Limoges1 Quadram Institute Bioscience1 Washington University in St. Louis1 University of Queensland1 FCBG1 RECETOX1 Wellcome-MRC Institute of Metabolic Science1 VIB1 Institut du thorax1 Shri Vinoba Bhave Civil Hospital1 BSRC Alexander Fleming1 CO-Graph1 IMBBC-HCMR1 University of Tartu1 The University of Sydney1 Database Center for Life Science1 AGRF1 university of manchester1 Size1 Queensland university of Technology1 University of Florida1 Max-Planck-Institut für Eisenforschung1 University of Edinburgh1 Medical Research Council Brain Network Dynamics Unit at the University of Oxford Nuffield Department of Clinical Neurosciences1 Defragmentation TS1 Hubrecht Institute1 Italian National Research Council1 University of Illinois at Urbana-Champaign1 Texas A&M University1 The Open University1 de.NBI Cloud1 BC Cancer Genome Sciences Centre1 Institute for Agricultural, Fisheries and Food Research (ILVO)1 CNRS1 University of Agriculture in Krakow1 BCCMULC1 University of Lausanne1 TRON1 Helmholtz-Zentrum Dresden-Rossendorf1 TUM - Technical University of Munich1 metagenome-workflows1 Inria1 Centre for Genomic Regulation (CRG)1 Universitat de Barcelona (UB)1 Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences1 Oak Ridge National Laboratory1 Centre for Genomic Regulation1 Pondicherry University1 Telethon Kids Institute1 University of Southern Denmark1 Friedrich Schiller University1 Centenary Institute1 Merck KGaA1 Helmholtz-Zentrum Dresden - Rossendorf1 CNIC1 Concordia University CSFG1 German Cancer Research Center (DKFZ)1 University of Córdoba1 Biocampus1 German BioImaging1 Leibniz Institute of Plant Biochemistry1 EOSC-Life1 French Agency for Food, Environmental and Occupational Health & Safety (Ploufragan-Plouzané-Niort Laboratory)1 SANBI, University of the Western Cape1 Institute of Applied Biosciences, Centre of Research and Technology, Hellas (INAB|CERTH)1 Mount Sinai1 Kyoto University1 DeSci Labs1 Adam Mickiewicz University1 University of Cambridge1 The North China University of Technology1 Yunnan Normal University1 cimorgh IT1 University of Bern1 The University of Arizona1 Mathematical Institute Polish Academy of Sciences1 yPublish1 Leibniz-Institut für Analytische Wissenschaften - ISAS - e.V.1 University of Bergen1 Bielefeld university of applied sciences and arts1 University of Oslo1 McGill University1 CholGen1 IBP1 CMB genomics1 Shandong Academy of Agricultural Sciences1 Institut National de Recherche Biomédicale1 Department of Physical Chemistry, Faculty of Science, Palacký University Olomouc1 National Libarary of Medicine1 Center for Open Bioimage Analysis1 Universitat Politècnica de Catalunya - BarcelonaTech (UPC)1 University of Amsterdam1 Labor Berlin1 European Synchrotron Radiation Facility (ESRF)1 The Jackson Laboratory1 University Health Network1 Leiden University1 Mid-Ohio Regional Planning Commission1 Yonsei university1 Southern Medical University, China1 Plant & Food Research1 University of Zurich1 Oklahoma State University1 Environment Agency Austria1 CNB1 CRIM1 Moscow Institute of Physics and Technology1 Metagenlab1 CHUV IMUL1 Shandong University1 University of Limerick1 Danmarks Tekniske Universitet1 Service computing center for DAG scheduling1 EGI Foundation1 University of Bologna1 Harbin Medical University1 Peking University1 More...

Germany44 United Kingdom34 Spain30 France29 Netherlands20 United States14 China12 Australia9 Belgium8 Switzerland8 Italy8 Canada5 Sweden5 Austria4 Czechia4 Afghanistan3 Brazil3 Denmark3 Greece3 India3 Norway3 Poland3 Japan2 Congo, The Democratic Republic of the1 Estonia1 Ireland1 Iran1 Kenya1 South Korea1 New Zealand1 Russian Federation1 South Africa1 More...

Bioinformatics24 Scientific workflow developement9 Metagenomics8 Software Engineering7 Cheminformatics6 Machine Learning6 Data Management5 Systems Biology5 Microbiology4 Genomics4 Python4 Workflows3 Bioengineering3 Computer Science3 AI3 NGS3 Biochemistry2 Metabolomics2 R2 Biostatistics2 Metabarcoding2 phylogenomics2 image analysis2 high-performance computing2 astronomy2 evolution2 High Performance Computing2 Genetics1 Molecular Biology1 Synthetic Biology1 Computer Aided Design1 Retrosynthesis1 Neuroscience1 algorithm1 bash1 Ecophysiology1 amplicon analysis1 Molecular Modelling1 Biomolecular Dynamics Simulations1 Database Development1 Protein Structural Alignment1 phylogenetics1 Plant Sciences1 WDL1 Lipidomics1 workflow managers1 open source1 fuzzy logic1 graphs1 numerical methods1 Geospatial1 Computer Vision1 More...

Python17 Workflows13 R10 Jupyter notebook7 Databases5 CWL5 Transcriptomics4 Machine Learning4 Galaxy4 Snakemake4 Genomics3 Java3 Web services3 Nextflow3 Single Cell analysis2 C/C++2 Conda2 Git2 Molecular Biology1 Mathematical Modelling1 Genetic analysis1 Metabolomics1 Mass spectrometry1 Chromatography1 Cytoscape1 nf-core1 Web1 MIAPPE1 WDL1 Autosubmit1 Cylc1 ecFlow1 C1 Parsl1 OGC1 More...