Workflows
What is a Workflow?Filters
Query
Created At
Updated At
Tool
StringTie1
MultiQC10
SAMtools7
BEDTools5
Bowtie 24
Cutadapt4
fastp4
MACS4
Gromacs3
taxonomy_krona_chart3
AmberTools2
biomformat2
BWA2
Cufflinks2
FastQC2
FASTX-Toolkit2
GenomeScope 2.02
kraken22
lofreq2
MAPseq2
Open Babel2
RDKit2
STAR2
ABRicate1
anndata1
BamTools1
Bandage1
BUSCO1
bx-python1
ChemicalToolbox1
Clustal 2 (Clustal W, Clustal X)1
cmsearch-deoverlap1
eggNOG-mapper v21
FastTree1
Flye1
gffread1
ggplot21
GOseq1
Helixer1
Infernal1
Integron Finder1
InterProScan (EBI)1
ISEScan1
JBrowse1
KrakenTools1
MaxQuant1
Medaka1
MetaNovo1
Minimap21
msConvert1
MSstats1
NanoPlot1
Newick Utilities1
OMArk1
PlasmidFinder1
PRINSEQ1
SCANPY1
SeqCode1
snpEff1
SuCOS1
ToolDistillator1
Trimmomatic1
Unipept1
More...
Workflow type
Galaxy1
Submitter
WorkflowHub Bot1
Tests
Passing1
This workflow takes a collection of BAM (output of STAR) and a gtf. It extends the input gtf using de novo annotation.