CNVkit1 fastp9 BWA7 MaBoSS7 Minimap27 PhysiCell7 BLAST6 FastQC6 Galaxy6 kraken26 BCFtools5 MultiQC5 shovill5 R4 SAMtools4 Seurat4 SPAdes4 taxonomy_krona_chart4 Bowtie 23 BUSCO3 cisTEM3 Konstanz Information Miner (KNIME)3 MotionCor23 Scipion3 Variant Effect Predictor (VEP)3 anndata2 BBMap2 CellProfiler2 ChiRA2 Cutadapt2 Flye2 MACS2 nanopolish2 NGSUtils2 picard_samtofastq2 PredPrIn2 QUAST2 seqtk2 Snakemake2 SnpSift2 Unicycler2 VADR2 vardict2 vcfanno2 vcfutils2 XMIPP2 ABRicate1 AdapterRemoval1 AnnotSV1 Bandage1 BEDTools1 Bioconductor1 Biopython1 BlobToolKit1 BRAKER11 bx-python1 CARNIVAL1 cBioPortal1 CheckM1 clusterProfiler1 COMBAT-TB Workbench1 decoupleR1 Delly21 DESeq21 Filtlong1 FLASH1 FreeBayes1 funannotate1 GADES1 Galaxy Image Analysis1 GATK1 gblocks1 GBMatch - GBMPredictor1 GenomeScope 2.01 GetOrganelle1 ggtree1 GSEA1 hAMRonization1 Hifiasm1 htseqcount1 ImageJ21 Infernal1 iqtree1 lofreq1 MAFFT1 Mash1 MaxBin1 Merqury1 Meryl1 MetaBAT 21 MitoHiFi1 MITOS1 MOB-suite1 MolMeDB1 NanoPlot1 ngsReports1 OBITools1 PhysiBoSS1 pilon1 PLINK1 Prodigal1 progeny1 protexcluder1 purge_dups1 QualiMap1 Racon1 RDKit1 RepeatMasker1 RepeatModeler1 SCANPY1 scikit-image1 SemiBin1 seqkit1 SeqSero21 SISTR1 snippy1 STAR1 staramr1 StringTie1 TaxonKit1 tb-profiler1 Trim Galore1 varlociraptor1 VarScan1 WGCNA1 More...

Snakemake1

annotsv1 Bioinformatics1 CNVkit1 Copy Number Variation1 Magic1 Snakemake1

Carlos Classen1

Institute for Human Genetics and Genomic Medicine Aachen1

Independent Teams1

Carlos Classen1

Biomedical science1 Copy number variation1 Data visualisation1

Copy number variation detection1 Gene functional annotation1

Stable1