Workflows
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Snakemake1
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Sebastian Röner1
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KircherLab1
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Sebastian Röner1
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Biomedical science1
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Nucleic acid sites, features and motifs1
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Feature extraction1
Nucleic acid property calculation1
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Sequence alignment analysis (site correlation)1
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Workflow visible to you, out of a total of 1
Stable
cfDNA UniFlow is a unified, standardized, and ready-to-use workflow for processing whole genome sequencing (WGS) cfDNA samples from liquid biopsies. It includes essential steps for pre-processing raw cfDNA samples, quality control and reporting. Additionally, several optional utility functions like GC bias correction and estimation of copy number state are included. Finally, we provide specialized methods for extracting coverage derived signals and visualizations comparing cases and controls. ...
