Changes in component 'nf-core/taxonkit/lineage'
'modules/nf-core/taxonkit/lineage/meta.yml' is unchanged
Changes in 'taxonkit/lineage/main.nf':
--- modules/nf-core/taxonkit/lineage/main.nf
+++ modules/nf-core/taxonkit/lineage/main.nf
@@ -9,7 +9,9 @@
 
     input:
     tuple val(meta), val(taxid), path(taxidfile)
-    path taxdb
+    path taxdb, stageAs: 'taxdump/'              // Path to a directory containing names.dmp and nodes.dmp; use this or the below two
+    path names, stageAs: 'taxdump/names.dmp'    // Path to names.dmp; alternative to taxdb
+    path nodes, stageAs: 'taxdump/nodes.dmp'    // Path to nodes.dmp; alternative to taxdb
 
     output:
     tuple val(meta), path("*.tsv"), emit: tsv
@@ -26,7 +28,7 @@
     taxonkit \\
         lineage \\
         $args \\
-        --data-dir $taxdb \\
+        --data-dir taxdump \\
         --threads $task.cpus \\
         --out-file ${prefix}.tsv \\
         ${taxid? "<<< '$taxid'": taxidfile}

'modules/nf-core/taxonkit/lineage/environment.yml' is unchanged
'modules/nf-core/taxonkit/lineage/tests/main.nf.test.snap' is unchanged
'modules/nf-core/taxonkit/lineage/tests/main.nf.test' is unchanged
************************************************************
