/*
 * -------------------------------------------------
 *  Nextflow config file for running tests
 * -------------------------------------------------
 * Defines bundled input files and everything required
 * to run a fast and simple test. Use as follows:
 *   nextflow run qbic-pipelines/bamtofastq -profile test
 */

params {
  config_profile_name = 'Test profile'
  config_profile_description = 'Minimal test dataset to check pipeline function'
  // Limit resources so that this can run on Travis
  max_cpus = 2
  max_memory = 6.GB
  max_time = 48.h
  
  // Input data
  input = ['https://github.com/nf-core/test-datasets/raw/eager/testdata/Mammoth/bam/JK2782_TGGCCGATCAACGA_L008_R1_001.fastq.gz.tengrand.fq.combined.fq.mapped.bam',
           "$baseDir/testdata/First_SmallTest_Paired.bam",
           "$baseDir/testdata/Second_SmallTest_Paired.bam",
           "$baseDir/testdata/wgEncodeUwRepliSeqK562G1AlnRep1.bam"
          ] 
}
