Research Object Crate for ERGA ONT+Illumina Collapsed Purge+QC v2311 (WF3)

The workflow takes a trimmed Illumina WGS paired-end reads collection, Collapsed contigs, and the values for transition parameter and max coverage depth (calculated from WF1) to run Purge_Dups. It produces purged Collapsed contigs assemblies, and runs all the QC analysis (gfastats, BUSCO, and Merqury).

Author

Diego De Panis, ERGA

License

MIT

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